Free Downloads: Molecular Biology

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BALLView is a standalone molecular modeling and visualization application.

BALLView is a standalone Molecular modeling and visualization application. Furthermore it is also a framework for developing Molecular visualization functionality. It is available free of charge under the GPL for Linux, Windows and MacOS.
BALLView is a free Molecular modeling and Molecular graphics tool. It provides fast OpenGL-based visualization of...

Category: Home & Education / Science
Publisher: Plone Foundation, License: Freeware, Price: USD $0.00, File Size: 38.0 MB
Platform: Windows



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DAMBE is a versatile software workbench for laboratories doing research in molecular biology and evolution.

DAMBE is a versatile software workbench for laboratories doing research in Molecular Biology and evolution.
Features:
Sequence alignment
¨ General sequence alignment with nucleotide and amino acid sequences
¨ Aligning protein-coding nucleotide sequences against aligned amino acid sequences


Bioinformatics tools
¨...

Category: Home & Education / Miscellaneous
Publisher: Xuhua Xia, License: Freeware, Price: USD $0.00, File Size: 9.4 MB
Platform: Windows

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Molecular Genetics is a program that will help students understand better the molecular structure.

Molecular Genetics is a program that will help students understand better the Molecular structure.

The demo of the program 'Molecular Genetics' consists of the introduction, the main menu and two of the six modules of the complete package, namely :
Module 2: The structure of DNA Parts of module 6: RNA translation.
Parts of module 6: RNA...

Category: Home & Education / Science
Publisher: F. Triep Multimedia, License: Shareware, Price: USD $35.00, File Size: 13.6 MB
Platform: Windows

5 Stars5 Stars5 Stars5 Stars5 Stars Shareware
VisProtSSS Screenshot
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In the Age of Molecular Biology look at the most intrigue molecules - Proteins, DNA, if you have a rest. You can use Screen Saver VisProtSSS to look at the proteins in stereo for the education purposes, as a hobby, with curiosity or simply for a fun.

In the Age of Molecular Biology look at the most intrigue molecules - Proteins and DNA, if you have a rest. Any person (with binocular sight) can see 3D Stereo image of complex proteins on a full screen, using simple and the cheapest anaglyph technology (color separated). You can use Screen Saver VisProtSSS to look at the Proteins and DNA in stereo for the scientific goals,...

Category: Desktop Enhancements / Screensavers
Publisher: Protein Systems Ltd., License: Shareware, Price: USD $15.00, File Size: 2.4 MB
Platform: Windows

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MGLTools is a software developed at the Molecular Graphics Laboratory (MGL) of The Scripps Research Institute for visualization and analysis of molecular structures.

MGLTools is a software developed at the Molecular Graphics Laboratory (MGL) of The Scripps Research Institute for visualization and analysis of Molecular structures.
Its three main applications are:
- AutoDockTools is graphical front-end for setting up and running AutoDock - an automated docking software designed to predict how small molecules, such as substrates or...

Category: Home & Education / Science
Publisher: The Scripps Research Institute, License: Freeware, Price: USD $0.00, File Size: 34.4 MB
Platform: Windows

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GEC and LBS are two languages for modeling in synthetic biology and systems biology, respectively.

GEC and LBS are two languages for modeling in synthetic Biology and systems Biology, respectively. A prototype Windows tool for editing, compiling and simulating GEC and LBS models can be installed by downloading and executing the Setup file. A Readme, a License file and some example GEC and LBS models will be installed during setup.

Category: Software Development / Misc. Programming
Publisher: Michael David Pedersen, License: Freeware, Price: USD $0.00, File Size: 4.5 MB
Platform: Windows

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Easily calculate weight of molar mass withChemiasoft Molecular Weight Calculator.

Easily calculate weight of molar mass withChemiasoft Molecular Weight Calculator.
Some features:
-Easy to use Molecular weight calculator
-Calculate Molecular weight or molar mass of any chemical formula
-Insert elements from an embedded periodic table

Category: Home & Education / Miscellaneous
Publisher: Chemiasoft, License: Freeware, Price: USD $0.00, File Size: 2.0 MB
Platform: Windows

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The Molecular Descriptor Correlations is a free tool for the analysis of molecular descriptor correlations calculated on 221,860 molecules.

The Molecular Descriptor Correlations is a free tool for the analysis of Molecular descriptor correlations calculated on 221,860 molecules.

Main features:
-221,860 molecules from the NCI dataset have been splitted into four datasets (each including about 55,000 molecules) and these datasets have been analyzed in order to propose a global overview about...

Category: Business & Finance / Applications
Publisher: Milano Chemometrics and QSAR Research Group, License: Freeware, Price: USD $0.00, File Size: 2.6 MB
Platform: Windows

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HyperChem is a sophisticated molecular modeling environment that is known for its quality, flexibility, and ease of use.

HyperChem is a sophisticated Molecular modeling environment that is known for its quality, flexibility, and ease of use. Uniting 3D visualization and animation with quantum chemical calculations, Molecular mechanics, and dynamics, HyperChem puts more Molecular modeling tools at your fingertips than any other Windows program.

HyperChem Release 8.0 incorporates...

Category: Home & Education / Science
Publisher: Hypercube, Inc., License: Shareware, Price: USD $995.00, File Size: 243.8 MB
Platform: Windows

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Easy to use aligner software for DNA sequence contig assembly, contig editing, and mutation detection for Windows. It is a molecular biology software that can view and assemble sequences in contigs. Features: end clip, export, assemblies, detection.

Description: Easy to use aligner software for DNA sequence contig assembly, contig editing, and mutation detection for Windows. It is a Molecular Biology software that can view and assemble sequences in contigs.Features: end clip, export sequences, assemblies, code detection. Description: DNA Baser is an affordable alternative for assembly of DNA sequences and generation of...

Category: Home & Education
Publisher: CubicDesign, License: Shareware, Price: USD $490.00, File Size: 1.3 MB
Platform: Windows, Mac, Linux

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Biodesigner is a molecular modeling and visualization program for personal computers.

Biodesigner is a Molecular modeling and visualization program for personal computers.
The program is capable of creating homologous models of proteins, evaluate, and refine the models.
The program provides multiple file format support (PDB, Hyperchem, Alchemy, Insight, Sybyl).
Also features realtime monitoring of various Molecular properties, including...

Category: Multimedia & Design / Multimedia App's
Publisher: Piotr Rotkiewicz, License: Freeware, Price: USD $0.00, File Size: 2.0 MB
Platform: Windows

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Moil supports the usual set of tools for molecular modeling by classical mechanics, including energy calculations, energy minimization, molecular dynamics, and more.

Moil supports the usual set of tools for Molecular modeling by classical mechanics, including energy calculations, energy minimization, Molecular dynamics, and more.
Moil allows for reasonably straightforward conversion of PDB files to computable datasets (coordinate and energy templates).

Category: Multimedia & Design / Image Editing
Publisher: MOIL11 team, License: Shareware, Price: USD $0.00, File Size: 17.3 MB
Platform: Windows

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FormulaWeight is a free scientific software to calculate formula/molecular weights of chemical substances.

FormulaWeight is a free scientific software to calculate formula/Molecular weights of chemical substances. The newest atomic weights from IUPAC are used in this software. Perhaps no further information is needed if you know something about chemistry. The following is an example of calculating the Molecular weight of ethanol that is the second most important liquid material, at...

Category: Business & Finance / Calculators
Publisher: Harukazu YOSHINO, License: Freeware, Price: USD $0.00, File Size: 383.3 KB
Platform: Windows

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SketchEl is an interactive chemical molecule sketching tool, and molecular spreadsheet data entry application.

SketchEl is an interactive chemical molecule sketching tool, and Molecular spreadsheet data entry application. The feature set provided by the Molecular sketcher is largely limited to the minimum features required to conveniently edit diagram representati

Category: Home & Education / Mathematics
Publisher: sketchel.sourceforge.net, License: Freeware, Price: USD $0.00, File Size: 392.0 KB
Platform: Unknown

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Systems Biology Workbench (SBW), is an open source framework connecting heterogeneous software applications.

Systems Biology Workbench (SBW), is an open source framework connecting heterogeneous software applications. SBW is made up of two kinds of components: Modules: These are the applications that a user would use. We have a wide collection of model editing, model simulation and model analysis tools.Framework: The software framework that allows developers to cross programming language...

Category: Home & Education / Science
Publisher: KGI, License: Freeware, Price: USD $0.00, File Size: 43.8 MB
Platform: Windows

5 Stars5 Stars5 Stars5 Stars5 Stars Shareware
VisProt3DS Screenshot
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In the age of Molecular Biology you have a chance to analyze Proteins in 3D STEREO mode on your computer, which you have just now. VisProt3DS can show Proteins and DNA, using the cheapest Anaglyph stereo mode, which can work on any usual computer.

In the age of Molecular Biology and Genetic Engineering you have a chance to see and interactively analyze 3D structure of such complex Biological Macromolecules as Proteins and DNA in 3D STEREO mode on your computer, which you have just now. Using The Stereoscopic Visual Analyzer of Biological Macromolecules (VisProt3DS) you can look at Proteins and DNA (in PDB format) by the...

Category: Home & Education / Science
Publisher: Molecular Systems Ltd., License: Shareware, Price: USD $299.00, File Size: 2.2 MB
Platform: Windows

Shareware
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BioStat - user-friendly biology and medicine oriented statistical software.

BioStat - user-friendly Biology and medicine oriented statistical software. With BioStat 2007, one gets a robust suite of statistics tools and graphical analysis methods that are easily accessed though a simple and straightforward interface. While BioStat 2007 is a ?heavy-duty? Biology and medicine oriented professional statistical analysis tool, the interface is so simple that...

Category: Business & Finance / Applications
Publisher: AnalystSoft, License: Shareware, Price: USD $100.00, File Size: 14.7 MB
Platform: Windows

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The most engaging cell biology primer you'll ever find.

The most engaging cell Biology primer you'll ever find.
Winner of a World Summit Award, this program tackles a complex subject, makes it interesting and facilitates learning. Cells and their components are brought to life for middle and secondary school students with inquiry-based learning that both engages and informs.

Category: Home & Education / Science
Publisher: Digital Frog International, License: Shareware, Price: USD $40.00, File Size: 40.6 MB
Platform: Windows

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Exploring matter with Synchrotron Light is an interactive and detailed introduction to the physics and technology of radiation generated using accelerators and the corresponding widespread high-tech applications in science, medicine and engineering.

Exploring matter with Synchrotron Light is an interactive and detailed introduction to the physics and technology of radiation generated using accelerators and the corresponding widespread high-tech applications in science, medicine and engineering. Making use of the most advanced multimedia techniques today, the CD-ROM is conceived for a worldwide audience, both diverse and specialised, with...

Category: Home & Education / Science
Publisher: Nanopolis, License: Commercial, Price: USD $117.00, File Size: 1.4 MB
Platform: Windows, Mac

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23 simulated science experiments for Biology, Chemistry and Physics.

23 simulated science experiments for Biology, Chemistry and Physics. Science Investigations 2 is an easy-to-use interactive science experiments software program which will help students learn and practice skills such as planning an experiment, making predictions and processing data.

Category: Home & Education / Science
Publisher: Focus Educational Software Ltd., License: Shareware, Price: USD $49.05, File Size: 10.1 MB
Platform: Windows

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MoCalc: Molecular Calculation Interface is a graphical user interface for the molecular modeling programs Gamess1, Mopac2, Tinker3, Babel4 and Rasmol5.

MoCalc: Molecular Calculation Interface is a graphical user interface for the Molecular modeling programs Gamess1, Mopac2, Tinker3, Babel4 and Rasmol5. MoCalc helps the user in the preparation of input files, the submission of calculations, the analysis of the results and the visualization of the involved chemical structures. Some properties can also be calculated by MoCalc.
...

Category: Business & Finance / Applications
Publisher: Anderson Coser Gaudio, License: Freeware, Price: USD $0.00, File Size: 11.3 MB
Platform: Windows

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JigCell is an effort to develop and maintain an open source modeling environment for computational biology.

JigCell is an effort to develop and maintain an open source modeling environment for computational Biology. The goal of this project is to support building and testing models for studying complex biochemical regulatory systems in general, and the cell cycle control system in particular.

Category: Web Authoring / JavaScript
Publisher: vt edu, License: Freeware, Price: USD $0.00, File Size: 8.1 MB
Platform: Windows

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Ascalaph Graphics is a program for molecular graphics and dynamics, as well as a graphical shell to package of molecular dynamics MDynaMix. .

Ascalaph Graphics is a program for molecular graphics and dynamics, as well as a graphical shell to package of molecular dynamics MDynaMix.

Category: Home & Education / Mathematics
Publisher: biomolecular-modeling.com, License: Freeware, Price: USD $0.00, File Size: 16.1 MB
Platform: Windows, Mac, Vista

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RPluto - Graphical Display of Molecular and Crystal Structures.

RPluto - Graphical Display of Molecular and Crystal Structures.

Main features:

- A range of input file formats (CSD FDAT, SHELX and CIF formats)
- Data typed in free-format style (i.e. from file or keyboard), which may be useful for comparing current work with examples from the CSD
- Display of both Molecular and packing diagrams
-...

Category: Home & Education / Science
Publisher: CCDC, License: Freeware, Price: USD $0.00, File Size: 2.5 MB
Platform: Windows

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Main features:

-Evaluate molecules for binding sites, reactive sites, and pockets, using our exact charge distribution profiles and optimized molecular structures.

Main features:

-Evaluate molecules for binding sites, reactive sites, and pockets, using our exact charge distribution profiles and optimized Molecular structures.

-Calculate optimized Molecular structures for molecules not in existing databases. Reduce your reliance on Molecular structure databases.

-Edit protein structures by...

Category: Home & Education / Miscellaneous
Publisher: Millsian INC, License: Shareware, Price: USD $300.00, File Size: 2.0 MB
Platform: Windows

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License:  All 1 2 | Free