Free Downloads: Software Molecular Biology Diagrams
License: All | Free
BALLView is a standalone molecular modeling and visualization application.
BALLView is a standalone Molecular modeling and visualization application. Furthermore it is also a framework for developing Molecular visualization functionality. It is available free of charge under the GPL for Linux, Windows and MacOS.
BALLView is a free Molecular modeling and Molecular graphics tool. It provides fast OpenGL-based visualization of...
Category: Home & Education / Science
Publisher: Plone Foundation, License: Freeware, Price: USD $0.00, File Size: 38.0 MB
Platform: Windows
RPluto - Graphical Display of Molecular and Crystal Structures.
RPluto - Graphical Display of Molecular and Crystal Structures.
Main features:
- A range of input file formats (CSD FDAT, SHELX and CIF formats)
- Data typed in free-format style (i.e. from file or keyboard), which may be useful for comparing current work with examples from the CSD
- Display of both Molecular and packing Diagrams
...
Category: Home & Education / Science
Publisher: CCDC, License: Freeware, Price: USD $0.00, File Size: 2.5 MB
Platform: Windows
DAMBE is a versatile Software workbench for laboratories doing research in Molecular Biology and evolution.
Features:
Sequence alignment
¨ General sequence alignment with nucleotide and amino acid sequences
¨ Aligning protein-coding nucleotide sequences against aligned amino acid sequences
Bioinformatics tools
¨...
Category: Home & Education / Miscellaneous
Publisher: Xuhua Xia, License: Freeware, Price: USD $0.00, File Size: 9.4 MB
Platform: Windows
MGLTools is a Software developed at the Molecular Graphics Laboratory (MGL) of The Scripps Research Institute for visualization and analysis of Molecular structures.
Its three main applications are:
- AutoDockTools is graphical front-end for setting up and running AutoDock - an automated docking Software designed to predict how small molecules, such as...
Category: Home & Education / Science
Publisher: The Scripps Research Institute, License: Freeware, Price: USD $0.00, File Size: 34.4 MB
Platform: Windows
GEC and LBS are two languages for modeling in synthetic biology and systems biology, respectively.
GEC and LBS are two languages for modeling in synthetic Biology and systems Biology, respectively. A prototype Windows tool for editing, compiling and simulating GEC and LBS models can be installed by downloading and executing the Setup file. A Readme, a License file and some example GEC and LBS models will be installed during setup.
Category: Software Development / Misc. Programming
Publisher: Michael David Pedersen, License: Freeware, Price: USD $0.00, File Size: 4.5 MB
Platform: Windows
The Molecular Descriptor Correlations is a free tool for the analysis of Molecular descriptor correlations calculated on 221,860 molecules.
Main features:
-221,860 molecules from the NCI dataset have been splitted into four datasets (each including about 55,000 molecules) and these datasets have been analyzed in order to propose a global overview about...
Category: Business & Finance / Applications
Publisher: Milano Chemometrics and QSAR Research Group, License: Freeware, Price: USD $0.00, File Size: 2.6 MB
Platform: Windows
Easily calculate weight of molar mass withChemiasoft Molecular Weight Calculator.
Easily calculate weight of molar mass withChemiasoft Molecular Weight Calculator.
Some features:
-Easy to use Molecular weight calculator
-Calculate Molecular weight or molar mass of any chemical formula
-Insert elements from an embedded periodic table
Category: Home & Education / Miscellaneous
Publisher: Chemiasoft, License: Freeware, Price: USD $0.00, File Size: 2.0 MB
Platform: Windows
Red Koda is an easy to use UML authoring tool.
Red Koda is an easy to use UML authoring tool. It supports 13 UML2 Diagrams. With short-cut keys and auto resize, you can finish your Diagrams faster and faster. Other features like snaps to guidelines. copy to clipboard, export graphics format BMP, JPEG, GIF and print with actual size, fit to page and fit to page keep aspect ratio.
Support Diagrams includes: class...
Category: Software Development / Misc. Programming
Publisher: Red Koda Software, License: Freeware, Price: USD $0.00, File Size: 519.0 KB
Platform: Windows
FormulaWeight is a free scientific Software to calculate formula/Molecular weights of chemical substances. The newest atomic weights from IUPAC are used in this Software. Perhaps no further information is needed if you know something about chemistry. The following is an example of calculating the Molecular weight of ethanol that is the second most important liquid...
Category: Business & Finance / Calculators
Publisher: Harukazu YOSHINO, License: Freeware, Price: USD $0.00, File Size: 383.3 KB
Platform: Windows
Systems Biology Workbench (SBW), is an open source framework connecting heterogeneous Software applications. SBW is made up of two kinds of components: Modules: These are the applications that a user would use. We have a wide collection of model editing, model simulation and model analysis tools.Framework: The Software framework that allows developers to cross programming...
Category: Home & Education / Science
Publisher: KGI, License: Freeware, Price: USD $0.00, File Size: 43.8 MB
Platform: Windows
Biodesigner is a molecular modeling and visualization program for personal computers.
Biodesigner is a Molecular modeling and visualization program for personal computers.
The program is capable of creating homologous models of proteins, evaluate, and refine the models.
The program provides multiple file format support (PDB, Hyperchem, Alchemy, Insight, Sybyl).
Also features realtime monitoring of various Molecular properties, including...
Category: Multimedia & Design / Multimedia App's
Publisher: Piotr Rotkiewicz, License: Freeware, Price: USD $0.00, File Size: 2.0 MB
Platform: Windows
SketchEl is an interactive chemical molecule sketching tool, and Molecular spreadsheet data entry application. The feature set provided by the Molecular sketcher is largely limited to the minimum features required to conveniently edit diagram representati
Category: Home & Education / Mathematics
Publisher: sketchel.sourceforge.net, License: Freeware, Price: USD $0.00, File Size: 392.0 KB
Platform: Unknown
MoCalc: Molecular Calculation Interface is a graphical user interface for the Molecular modeling programs Gamess1, Mopac2, Tinker3, Babel4 and Rasmol5. MoCalc helps the user in the preparation of input files, the submission of calculations, the analysis of the results and the visualization of the involved chemical structures. Some properties can also be calculated by MoCalc.
...
Category: Business & Finance / Applications
Publisher: Anderson Coser Gaudio, License: Freeware, Price: USD $0.00, File Size: 11.3 MB
Platform: Windows
JigCell is an effort to develop and maintain an open source modeling environment for computational Biology. The goal of this project is to support building and testing models for studying complex biochemical regulatory systems in general, and the cell cycle control system in particular.
Category: Web Authoring / JavaScript
Publisher: vt edu, License: Freeware, Price: USD $0.00, File Size: 8.1 MB
Platform: Windows
Ascalaph Graphics is a program for molecular graphics and dynamics, as well as a graphical shell to package of molecular dynamics MDynaMix.
Category: Home & Education / Mathematics
Publisher: biomolecular-modeling.com, License: Freeware, Price: USD $0.00, File Size: 16.1 MB
Platform: Windows, Mac, Vista
Software Ideas Modeler is a lightweight and powerful tool for the creation of UML Diagrams and some other Diagrams. It supports all 14 types of UML Diagrams, Mixed Diagram, Data Flow Diagram, Flowchart Diagram, Robustness Diagram, Entity Relationship Diagram, Requirement Diagram, User Interface modeling and CRC Card Diagram.
Category: Software Development / Misc. Programming
Publisher: Dusan Rodina, License: Freeware, Price: USD $0.00, File Size: 1.7 MB
Platform: Windows, Linux
The Molecular Workbench™ (MW) software is a versatile platform for science education.
The Molecular Workbench™ (MW) Software is a versatile platform for science education.
Category: Home & Education / Science
First, it is an open-ended modeling tool for designing and conducting powerful simulations across science and engineering.
Second, it provides an authoring system for instructional designers to create and publish simulation-based curriculum materials.
Publisher: Concord Consortium, Inc., License: Freeware, Price: USD $0.00, File Size: 86.4 MB
Platform: Windows
FormulaWeight2010 is a free scientific Software to calculate formula/Molecular weights of chemical substances. The newest atomic weights from IUPAC are used in this Software.
Category: Home & Education / Mathematics
Publisher: .ocn.ne.jp, License: Freeware, Price: USD $0.00, File Size: 388.3 KB
Platform: Windows, Mac, Vista
ChemicPro is a free chemistry software for students.
ChemicPro is a free chemistry Software for students.
Features:
-Molecular mass calculator
-Composition of compound- Get percentage of elements present in a compound
-Properties of elements in a compound- Get Density, Group, Period,Atomic no, Molecular mass, Melting point, Boiling point for elements
-List of elements-Show list of...
Category: Home & Education / Science
Publisher: Kunal Grover, License: Freeware, Price: USD $0.00, File Size: 421.3 KB
Platform: Windows
The electrical CAD Software, PC|SCHEMATIC Automation, gives you the peace of mind and overall view you need each day. Focus on the electrical design, and let the CAD Software handle the practical details.
You have pretty much completed everything, even before you begin. In the Automation CAD Software, you merely have to drag partial Diagrams and modules into...
Category: Business & Finance / Applications
Publisher: PC|SCHEMATIC, License: Freeware, Price: USD $0.00, File Size: 55.2 MB
Platform: Windows
This project has as objective the analysis of interactions between the protein motifs in Molecular docking with the mapping of protein surfaces.
With this aim in mind the first phase of the project was to develop the MSProt - Viewer. An open-source Software able to visualize protein structures in 3D.
The MSProt - Viewer was developed with the programming...
Category: Home & Education / Science
Publisher: UNIFESP, License: Freeware, Price: USD $0.00, File Size: 4.4 MB
Platform: Windows
COSMOview is a molecular 3D structure viewer and can open various formats.
COSMOview is a Molecular 3D structure viewer and can open various formats.
COSMOview features:
- open general formats xyz, sdf, ml2, pdb (only 3D structure)
- open TURBOMOLE coord files
- open COSMOtherm cosmo, energy files
- display wrl (VRML) surface files
- save molecule pictures as png graphics file
- rotate and zoom view
- label atoms...
Category: Multimedia & Design / Graphics Viewers
Publisher: COSMOlogic GmbH & Co. KG, License: Freeware, Price: USD $0.00, File Size: 18.7 MB
Platform: Windows
calculate molecular weight of any chemical formula, easy to use and accurate, embeded periodic table inside for easy insert elemnts fromperiodic table,for student, chemist, scientist, teachers and analyst.
Category: Home & Education / Science
Publisher: Chemiasoft, License: Freeware, Price: USD $0.00, File Size: 2.0 MB
Platform: Windows
Simple editor of block diagrams.
Simple editor of block Diagrams. It is intended for the simulation of algorithms on the screen, but not on the paper. Block Diagrams are the collection of the rectangular blocks, connect together with vectors. You can use own styles for adjusting fonts, pens and brushes for blocks and vectors.
Category: Software Development / Tools & Editors
Publisher: PWS, License: Freeware, Price: USD $0.00, File Size: 522.2 KB
Platform: Windows
ACD/ChemSketch Freeware is a drawing package that allows you to draw chemical structures including organics, organometallics, polymers, and Markush structures. It also includes features such as calculation of Molecular properties (e.g., Molecular weight, density, molar refractivity etc.), 2D and 3D structure cleaning and viewing, functionality for naming structures (fewer than 50...
Category: Multimedia & Design / Multimedia App's
Publisher: ACDLabs, License: Freeware, Price: USD $0.00, File Size: 39.0 MB
Platform: Windows
GAMESS is a General Atomic and Molecular Electronic Structure System written and maintaned by the Gordon research group a Iowa State University.
GAMESS is a program for ab initio Molecular quantum chemistry. Briefly, GAMESS can compute SCF wavefunctions ranging from RHF, ROHF, UHF, GVB, and MCSCF. Correlation corrections to these SCF wavefunctions include Configuration...
Category: Home & Education / Science
Publisher: Iowa State University, License: Freeware, Price: USD $0.00, File Size: 649.0 MB
Platform: Windows
The Library GraphDiag is intended for building graph and Diagrams on HBITMAP, surface DirectDraw and in file BMP format. The Library can build the graphs on entered text line and Diagrams, as from tables, which format is provided by developer, so and from files HTML-format and from XLS files Excel. Given version first and is not deprived defect and restrictions. The Restrictions...
Category: Software Development / Components & Libraries
Publisher: Kruchinin Aleksandr, License: Freeware, Price: USD $0.00, File Size: 67.0 KB
Platform: Windows
Cytoscape is an open source bioinformatics Software platform for visualizing Molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.
Although Cytoscape was originally designed for biological research, now it is a general platform for complex network analysis and visualization.
Category: Business & Finance / Applications
Publisher: Cytoscape Consortium, License: Freeware, Price: USD $0.00, File Size: 87.2 MB
Platform: Windows
The BPMN 2.0 Modeler for Visio is a standalone Visio extension to draw and model business processes. It is a comprehensive user friendly package. The BPMN 2.0 Modeler for Visio supports the complete proposed set of BPMN 2.0 elements (flow objects, connecting objects, swimlanes, artifacts and data). The BPMN 2.0 Modeler for Visio allows users to produce Process Diagrams, Collaboration...
Category: Business & Finance / Database Management
Publisher: Trisotech Inc., License: Freeware, Price: USD $0.00, File Size: 21.0 MB
Platform: Windows
Freeware
Create flowcharts easily with this free Windows Software. Whether you're mapping out ideas, laying out the structure of your organization or creating UML Diagrams, ClickCharts is the perfect user-friendly program to get you going. Simplify complex processes, troubleshoot bottlenecks and find areas for improvement. Organize your ideas visually and make even the most complicated...
Category: Business & Finance / Business Finance
Publisher: NCH Software, License: Freeware, Price: USD $0.00, File Size: 1.7 MB
Platform: Windows
Create flowcharts easily with this free Windows Software. Whether you're mapping out ideas, laying out the structure of your organization or creating UML Diagrams, ClickCharts is the perfect user-friendly program to get you going. Simplify complex processes, troubleshoot bottlenecks and find areas for improvement. Organize your ideas visually and make even the most complicated...
Category: Business & Finance / Presentation Tools
Publisher: NCH Software, License: Freeware, Price: USD $0.00, File Size: 570.3 KB
Platform: Windows
The EDGE Diagram Reader is a special version of EDGE Diagrammer that can read, display, and print Diagrams but cannot be used to edit them. It is provided entirely FREE of charge for anyone to use and distribute as they choose. It will never time-out and your license to use it will not expire. Those who are familiar with the success of Adobe Acrobat Reader will recognize the value of a...
Category: Software Development / Misc. Programming
Publisher: Pacestar Software, License: Freeware, Price: USD $0.00, File Size: 4.0 MB
Platform: Windows
Freeware
Design flowcharts and Diagrams easily with this free Mac Software. Quickly create strong visuals of an organization, process, mind map, UML diagram and more. Map out your value streams and data flow. Find bottlenecks in the process and ways to optimize productivity. Jump start the process with template options or start fresh with your choice of shapes, symbols, line connector...
Category: Business & Finance / Business Finance
Publisher: NCH Software, License: Freeware, Price: USD $0.00, File Size: 4.6 MB
Platform: Mac
This program quickly and easily calculates reinforced concrete column interaction diagrams.
This program quickly and easily calculates reinforced concrete column interaction Diagrams.
It will not allow you to save beam models to disk or to directly print results of an analysis.
DTcolumn creates interaction Diagrams for circular columns witch have reinforcing steel evenly distributed about a circular perimeter.
Category: Software Development / Management & Distribution
Publisher: DTWare, License: Freeware, Price: USD $0.00, File Size: 834.8 KB
Platform: Windows
This module describes and demonstrates some of the elementary thermophysical properties of interest in the study of fluid phases. Perform a Molecular dynamics simulation of a system of molecules interacting according to the Lennard-Jones model potential. Properties calculated during the simulation include thermodynamic properties (the internal energy and the pressure), structural...
Category: Home & Education / Miscellaneous
Publisher: Etomica, License: Freeware, Price: USD $0.00, File Size: 670 B
Platform: Windows
Create flowcharts easily with this free Windows Software. Whether you're mapping out ideas, laying out the structure of your organization or creating UML Diagrams, ClickCharts is the perfect user-friendly program to get you going. Simplify complex processes, troubleshoot bottlenecks and find areas for improvement. Organize your ideas visually and make even the most complicated...
Category: Business & Finance / Business Finance
Publisher: NCH Software, License: Freeware, Price: USD $0.00, File Size: 1.5 MB
Platform:
Orbital Viewer can display almost any atomic or molecular electron probability function.
Orbital Viewer can display almost any atomic or Molecular electron probability function. For atoms, this plotted function is the hydrogenic solution of Schrodinger's Equation. For molecules, the linear combination of atomic orbitals (LCAO) method is used.
There are three broad categories of what can be displayed: surfaces of constant probability, probability...
Category: Multimedia & Design / Graphics Viewers
Publisher: David Manthey, License: Freeware, Price: USD $0.00, File Size: 586.3 KB
Platform: Windows
ChemRate is a program that contains databases containing experimental results on unimolecular reactions, information pertaining to transition state and Molecular structures necessary for the calculation of high pressure rate constants and thermal functions respectively. It contains a master equation solver so that rate constants for unimolecular reactions in the energy transfer region...
Category: Business & Finance / Database Management
Publisher: Mokrushin Software, License: Freeware, Price: USD $0.00, File Size: 9.2 MB
Platform: Windows
However, it did produce, through the University of Manchester, the Accessible UML tool for helping blind people read Software engineering UML Diagrams. This enabled users to open UML Diagrams in the XMI XML format, a format for UML diagram files that can be exported by tools like Rational Rose and Poseidon UML. Users could then explore the diagram contents using the...
Category: Web Authoring / XML/CSS Utilities
Publisher: University of Manchester, License: Freeware, Price: USD $0.00, File Size: 3.5 MB
Platform: Windows
Plot4j is a Java library that permits to draw two-variables diagrams in a Cartesian plan.
Plot4j is a Java library that permits to draw two-variables Diagrams in a Cartesian plan. The Diagrams can be exported as images or visualized on Java Swing panels.
Category: Software Development / Misc. Programming
Publisher: brusoftware.com, License: Freeware, Price: USD $0.00, File Size: 84.9 KB
Platform: Mac, Linux, Windows
The D&C Scheme Editor is a desktop application for the creation of pneumatic circuit Diagrams in compliance with standards. Based on a pneumatic symbol library the creation of complex Diagrams is easy to perform.
Part lists can be generated by assigning material and item numbers to the diagram components.
Category: Utilities / Misc. Utilities
Publisher: Bosch Rexroth AG, License: Freeware, Price: USD $0.00, File Size: 33.3 MB
Platform: Windows
QuteMol is an interactive, high quality Molecular visualization application written by Marco Tarini and Paolo Cignoni of the Visual Computing Lab at the Institute of Information Science and Technologies (ISTI), an institute of the Italian National Research Council (CNR). QuteMol exploits current GPU capabilites through OpenGL shaders to offer an array of innovative visual effects.
Category: Home & Education / Science
Publisher: Nanorex, Inc, License: Freeware, Price: USD $0.00, File Size: 7.1 MB
Platform: Windows
Oligo Explorer was developed for Molecular biologists who want to design their PCR and sequencing primers by themselves. Oligo Explorer is an efficient easy-to-use tool to determine primer properties like Tm, GC%, primer loops and primer dimers.
Oligo Explorer also includes a powerful 'Primer wizard' tool that helps you to find suitable primer pairs for your...
Category: Internet / Browsers
Publisher: Gene Link, License: Freeware, Price: USD $0.00, File Size: 1.4 MB
Platform: Windows
The free Reader is an ActiveX control plugin that allows you to read and present
PyMOL-based Molecular data using Microsoft PowerPoint on Windows. Just like Adobe
Reader can only read PDFs, not create them, AxPyMOL Reader can only read PowerPoint
presentations with embedded PyMOL content, not create them. Please note that the
Reader will only read those files...
Category: Business & Finance / Business Finance
Publisher: Schrodinger LLC, License: Freeware, Price: USD $0.00, File Size: 7.8 MB
Platform: Windows
Graph visualization is a way of representing structural information as Diagrams of abstract graphs and networks. Automatic graph drawing has many important applications in Software engineering, database and web design, networking, and in visual interfaces
Category: Multimedia & Design
Publisher: graphviz.org, License: Freeware, Price: USD $0.00, File Size: 26.6 MB
Platform: Windows, Mac, Vista
It's great for creating chord Diagrams and then using those Diagrams in other programs, like word processors or image editors . This program is intended to be used as a documentation tool. It doesn't attempt to figure out what chord you created.
Click on the chart diagram to add notes. Click on the X above the string to toggle the string 0 or X (open or...
Category: Multimedia & Design / Digital Media Editors
Publisher: John Wagner, License: Freeware, Price: USD $0.00, File Size: 226.0 KB
Platform: Windows
20-sim is an advanced modeling and simulation package for Windows. With 20-sim you can simulate the behavior of dynamic systems, such as electrical, mechanical and hydraulic systems or any combination of these. 20-sim models may use iconic Diagrams, bond graphs, block Diagrams as well as differential equations. Used in mechatronics, control engineering, robotics, mechanical...
Category: Audio
Publisher: Controllab Products BV, License: Freeware, Price: USD $0.00, File Size: 0
Platform: Windows
A new and powerful software that you can get it for free on your computers.
A new and powerful Software that you can get it for free on your computers. The program system MOLGEN-MS is devoted to computer aided Molecular structure elucidation.
MOLGEN-MS is mainly adapted to low resolution electron impact mass spectra but also includes tools which allow to process high resolution data and results from atomic analysis.
Category: Multimedia & Design / Multimedia App's
Publisher: Lehrstuhl Mathematik II, Universitat Bayreuth, License: Freeware, Price: USD $0.00, File Size: 4.4 MB
Platform: Windows
Blueprint Software Modeler FREE Community Edition A free and powerful UML Software modeling tool implemented according to the latest UML2.1 standard; integrated with and built on top of the Eclipse3.2 IDE. The Community Edition supports the most important Diagrams: - Class Diagram - Package Diagram - Component Diagram - Composite Structure Diagram - Object Diagram - Use...
Category: Software Development
Publisher: @-portunity B.V., License: Freeware, Price: USD $0.00, File Size: 98.6 MB
Platform: Windows
Clear Viewer - a great way to share Allclear diagrams with your team!
Clear Viewer - a great way to share Allclear Diagrams with your team!
As an Allclear user you can easily share your Allclear process maps with your team members using the Clear Viewer. Clear Viewer is a freely-distributable application to enable non-Allclear users in an organization to easily view process maps created through Allclear. The Clear Viewer lets you open and view...
Category: Multimedia & Design / Graphics Viewers
Publisher: Proquis Limited, License: Freeware, Price: USD $0.00, File Size: 8.1 MB
Platform: Windows
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